BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003G04SP1|AL425174
(966 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1449 1859 0.0
3x_Contig1552 100 8e-21
>3x_Contig1449
Length = 7865
Score = 1859 bits (934), Expect = 0.0
Identities = 958/966 (99%), Gaps = 2/966 (0%)
Strand = Plus / Plus
Query: 1 gatctctagctacagtggtgatgtcacctactaatttatacttatccttatccaaatatt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3351 gatctctagctacagaggtgatgtcacctactaatttatacttatccttatccaaatatt 3410
Query: 61 cagcggtgaaaacaccagaagtaattggtctagcacgaacaccaagttgttccaaagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3411 cagcggtgaaaacaccagaagtaattggtctagcacgaacaccaagttgttccaaagcag 3470
Query: 121 ttactaatttcaaattctgttccaagaaacactgtctaacaacagccatggtatgatcat 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3471 taactaatttcaaattctgttccaagaaacactgtctaacaacagccatggtatgatcat 3530
Query: 181 cggtaattctaataccatcaatataatcaggttcgataccttgggcttccaatctaccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3531 cggtaattctaataccatcaatataatcaggttcgataccttgggcttccaatctaccgt 3590
Query: 241 tcacttgaggaccagtaccatgcaagacgattgggtacaacccaacgtgatacaaaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3591 tcacttgaggaccagtaccatgcaagacgattgggtacaacccaacgtgatacaaaaatg 3650
Query: 301 caaggsacgatgccaattcctgcaagttatcactgataatagcaccaccgactttaataa 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3651 caaggcacgatgccaattcctgcaagttatcactgataatagcaccaccgactttaataa 3710
Query: 361 cagcaaattgctgttgcgaaaccgaagtgaagtacttcaaatattgttctacttctcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3711 cagcaaattgctgttgcgaaaccgaagtgaagtacttcaaatattgttctacttctcttt 3770
Query: 421 tcgatccaatattgttcaataattgaataaccgtagatctagtcccagtagatccaacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3771 tcgatccaatattgttcaataattgaataaccgtagatctagtcccagtagatccaacac 3830
Query: 481 cgttagcactagaaacaaatcttttcgaataaccaactctctttgggattgaaggagaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3831 cgttagcactagaaacaaatcttttcgaataaccaactctctttgggattgaaggagaac 3890
Query: 541 atctagccaaaatcgaagcaactttgctcaaacgagatggattcaaacccttcgttgaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3891 atctagccaaaatcgaagcaactttgctcaaacgagatggattcaaacccttcgttgaca 3950
Query: 601 tcaacaatctcgcagatgggacagacatgttttcttcttcttcttcttcttcttcttctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3951 tcaacaatctcgcagatgggacagacatgttttcttcttcttcttcttcttcttcttctt 4010
Query: 661 cttcttcttcttcttcttctttatctaatcaaaatcctttaaagaagataaaacagttgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4011 cttcttcttcttcttcttctttatctaatcaaaatcctttaaagaagataaaacagttgg 4070
Query: 721 cttggctcactatcactgaaaaggcaggtatcaacactttcctgcaaacccytttaattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4071 cttggctcactatcactgaaaaggcaggtatcaacactttcctgcaaaccc-tttaattt 4129
Query: 781 gtcctgcagatggatagagctggtcttaamttcgattagacaataatgctgttcagtact 840
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4130 gtcctgcagatggatagagctggtcttaacttcgattagacaataatgctgttcagtact 4189
Query: 841 ttacgagttaactcatactttagatacctaatggaaatacttagcgaatgggaaamtgaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4190 ttacgagttaactcatactttagatacctaatggaaatacttagcgaatgggaaactgaa 4249
Query: 901 amcggttttctttatatgtgcgattcgctgagttgccawtttttttttttttttttgttt 960
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4250 aacggttttctttatatgtgcgattcgctgagttgcca-tttttttttttttttttgttt 4308
Query: 961 gactgg 966
||||||
Sbjct: 4309 gactgg 4314
>3x_Contig1552
Length = 11268
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8021 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7972
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8030 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7981
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8018 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7969
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8036 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7987
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8012 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7963
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8042 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7993
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8027 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7978
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8024 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7975
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8039 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7990
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8033 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7984
Score = 100 bits (50), Expect = 8e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 632 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 681
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8015 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 7966
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,664
Number of Sequences: 1807
Number of extensions: 24664
Number of successful extensions: 4336
Number of sequences better than 1.0e-20: 2
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)